Filesystem and files getting corrupted

[Daniel Hilst Selli]

I'm working on an embedded project based on var-som-am35 from TI. [1]

I experiencing a lot of corruption from files and even the entire 
filesystem... is there any guide on how debug filesystems corruption?

We already tryied vfat and ext3 fs.. changed media, changed machines... 
The filesystem runs on mmc card, or on usb flash drive... There is a 
java aplication running on top of this filesystem, which uses JMS, that 
is very I/O agressive..

Cheers,